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182
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BMCBI
2004
323views more  BMCBI 2004»
15 years 2 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
126
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WEBNET
2000
15 years 3 months ago
Experiences from the Development and Use of Simulation Software for Complex Systems Education
In this paper, we present our lessons from the design and use of two educational software tools for teaching behavioral modeling to graduate students of digital art. The tools, Pai...
Elpida Tzafestas
INFORMATICALT
2006
102views more  INFORMATICALT 2006»
15 years 2 months ago
Parallel DEM Software for Simulation of Granular Media
The paper describes the development and performance of parallel algorithms for the discrete element method (DEM) software. Spatial domain decomposition strategy and message passing...
Algirdas Maknickas, Arnas Kaceniauskas, Rimantas K...
BMCBI
2007
88views more  BMCBI 2007»
15 years 2 months ago
Use of DNA melting simulation software for in silico diagnostic assay design: targeting regions with complex melting curves and
Background: DNA melting curve analysis using double-stranded DNA-specific dyes such as SYTO9 produce complex and reproducible melting profiles, resulting in the detection of multi...
John P. Rasmussen, Christopher P. Saint, Paul T. M...
116
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CN
2000
128views more  CN 2000»
15 years 2 months ago
The Network Workbench: network simulation software for academic investigation of Internet concepts
Simulation offers significant advantages as a basis for academic projects in computer networking. many unimportant details can be abstracted away, and also because simulations can...
J. Mark Pullen