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ISBI
2008
IEEE
14 years 10 months ago
Integrated profiling of cell surface protein and nuclear marker for discriminant analysis
Cell membrane proteins play an important role in tissue architecture and cell-cell communication. We hypothesize that segmentation and multivariate characterization of the distrib...
Ju Han, Hang Chang, Kumari L. Andarawewa, Paul Yas...
CORR
2008
Springer
73views Education» more  CORR 2008»
13 years 10 months ago
On acceptance conditions for membrane systems: characterisations of L and NL
In this paper we investigate the affect of various acceptance conditions on recogniser membrane systems without dissolution. We demonstrate that two particular acceptance conditio...
Niall Murphy, Damien Woods
BMCBI
2011
13 years 4 months ago
Outer membrane proteins can be simply identified using secondary structure element alignment
Background: Outer membrane proteins (OMPs) are frequently found in the outer membranes of gram-negative bacteria, mitochondria and chloroplasts and have been found to play diverse...
Ren-Xiang Yan, Zhen Chen, Ziding Zhang
BMCBI
2005
114views more  BMCBI 2005»
13 years 9 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
BMCBI
2007
63views more  BMCBI 2007»
13 years 10 months ago
Prediction of the burial status of transmembrane residues of helical membrane proteins
Background: Helical membrane proteins (HMPs) play a crucial role in diverse cellular processes, yet it still remains extremely difficult to determine their structures by experimen...
Yungki Park, Sikander Hayat, Volkhard Helms