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AI
2010
Springer
15 years 27 days ago
Annotation Concept Synthesis and Enrichment Analysis
Annotation Enrichment Analysis (AEA) is a widely used analytical approach to process data generated by high-throughput genomic and proteomic experiments such as gene expression mic...
Mikhail Jiline, Stan Matwin, Marcel Turcotte
RECOMB
2004
Springer
16 years 6 months ago
Learning Regulatory Network Models that Represent Regulator States and Roles
Abstract. We present an approach to inferring probabilistic models of generegulatory networks that is intended to provide a more mechanistic representation of transcriptional regul...
Keith Noto, Mark Craven
189
Voted
BMCBI
2005
151views more  BMCBI 2005»
15 years 5 months ago
ProMiner: rule-based protein and gene entity recognition
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
Daniel Hanisch, Katrin Fundel, Heinz-Theodor Mevis...
ISBI
2008
IEEE
16 years 6 months ago
A landmark-based nonlinear elasticity model for mouse atlas registration
This paper is devoted to the registration of gene expression data to a neuroanatomical mouse atlas in two dimensions. We use a nonlinear elasticity regularization allowing large d...
Tungyou Lin, Erh-Fang Lee, Ivo D. Dinov, Carole Le...
BMCBI
2006
120views more  BMCBI 2006»
15 years 5 months ago
The Virtual Insect Brain protocol: creating and comparing standardized neuroanatomy
Background: In the fly Drosophila melanogaster, new genetic, physiological, molecular and behavioral techniques for the functional analysis of the brain are rapidly accumulating. ...
Arnim Jenett, Johannes E. Schindelin, Martin Heise...