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» Metabolic networks analysis using convex optimization
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GECCO
2007
Springer
159views Optimization» more  GECCO 2007»
13 years 11 months ago
Discrimination of metabolic flux profiles using a hybrid evolutionary algorithm
Studying metabolic fluxes is a crucial aspect of understanding biological phenotypes. However, it is often not possible to measure these fluxes directly. As an alternative, fluxom...
Stefan Bleuler, Eckart Zitzler
EVOW
2009
Springer
13 years 5 months ago
Evolutionary Approaches for Strain Optimization Using Dynamic Models under a Metabolic Engineering Perspective
One of the purposes of Systems Biology is the quantitative modeling of biochemical networks. In this effort, the use of dynamical mathematical models provides for powerful tools in...
Pedro Evangelista, Isabel Rocha, Eugénio C....
ICASSP
2010
IEEE
13 years 7 months ago
Stochastic cross-layer resource allocation for wireless networks using orthogonal access: Optimality and delay analysis
Efficient design of wireless networks requires implementation of cross-layer algorithms that exploit channel state information. Capitalizing on convex optimization and stochastic...
Antonio G. Marqués, Georgios B. Giannakis, ...
BMCBI
2004
89views more  BMCBI 2004»
13 years 7 months ago
Network analysis of metabolic enzyme evolution in Escherichia coli
Background: The two most common models for the evolution of metabolism are the patchwork evolution model, where enzymes are thought to diverge from broad to narrow substrate speci...
Sara Light, Per Kraulis
BMCBI
2007
148views more  BMCBI 2007»
13 years 7 months ago
Toward the automated generation of genome-scale metabolic networks in the SEED
Background: Current methods for the automated generation of genome-scale metabolic networks focus on genome annotation and preliminary biochemical reaction network assembly, but d...
Matthew DeJongh, Kevin Formsma, Paul Boillot, John...