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» Methods and Statistics for Combining Motif Match Scores
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DGCI
2008
Springer
13 years 9 months ago
Statistical Template Matching under Geometric Transformations
Abstract. We present a novel template matching framework for detecting geometrically transformed objects. A template is a simplified representation of the object of interest by a s...
Alexander Sibiryakov
BMCBI
2007
147views more  BMCBI 2007»
13 years 7 months ago
Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining
Background: Cis-acting transcriptional regulatory elements in mammalian genomes typically contain specific combinations of binding sites for various transcription factors. Althoug...
Xochitl C. Morgan, Shulin Ni, Daniel P. Miranker, ...
CIVR
2005
Springer
147views Image Analysis» more  CIVR 2005»
14 years 1 months ago
A Comparison of Score, Rank and Probability-Based Fusion Methods for Video Shot Retrieval
It is now accepted that the most e ective video shot retrieval is based on indexing and retrieving clips using multiple, parallel modalities such as text-matching, image-matching a...
Kieran McDonald, Alan F. Smeaton
BMCBI
2006
95views more  BMCBI 2006»
13 years 7 months ago
XcisClique: analysis of regulatory bicliques
Background: Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs si...
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. H...
BMCBI
2006
141views more  BMCBI 2006»
13 years 7 months ago
Identification of consensus RNA secondary structures using suffix arrays
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
Mohammad Anwar, Truong Nguyen, Marcel Turcotte