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BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
CVPR
2005
IEEE
14 years 9 months ago
Evaluating Image Retrieval
We present a comprehensive strategy for evaluating image retrieval algorithms. Because automated image retrieval is only meaningful in its service to people, performance character...
Nikhil V. Shirahatti, Kobus Barnard
RECOMB
2006
Springer
14 years 7 months ago
Predicting Experimental Quantities in Protein Folding Kinetics Using Stochastic Roadmap Simulation
Abstract. This paper presents a new method for studying protein folding kinetics. It uses the recently introduced Stochastic Roadmap Simulation (SRS) method to estimate the transit...
Tsung-Han Chiang, Mehmet Serkan Apaydin, Douglas L...
CORR
2011
Springer
208views Education» more  CORR 2011»
13 years 2 months ago
GRASP and path-relinking for Coalition Structure Generation
In Artificial Intelligence with Coalition Structure Generation (CSG) one refers to those cooperative complex problems that require to find an optimal partition, maximising a soci...
Nicola Di Mauro, Teresa Maria Altomare Basile, Ste...
BMCBI
2008
155views more  BMCBI 2008»
13 years 7 months ago
Extending pathways based on gene lists using InterPro domain signatures
Background: High-throughput technologies like functional screens and gene expression analysis produce extended lists of candidate genes. Gene-Set Enrichment Analysis is a commonly...
Florian Hahne, Alexander Mehrle, Dorit Arlt, Annem...