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» Microarray results: how accurate are they
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BMCBI
2007
171views more  BMCBI 2007»
13 years 9 months ago
Classification of microarray data using gene networks
Background: Microarrays have become extremely useful for analysing genetic phenomena, but establishing a relation between microarray analysis results (typically a list of genes) a...
Franck Rapaport, Andrei Zinovyev, Marie Dutreix, E...
BMCBI
2004
127views more  BMCBI 2004»
13 years 9 months ago
Optimized LOWESS normalization parameter selection for DNA microarray data
Background: Microarray data normalization is an important step for obtaining data that are reliable and usable for subsequent analysis. One of the most commonly utilized normaliza...
John A. Berger, Sampsa Hautaniemi, Anna-Kaarina J&...
BMCBI
2007
115views more  BMCBI 2007»
13 years 9 months ago
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis
Background: There are many fewer genes in the human genome than there are expressed transcripts. Alternative splicing is the reason. Alternatively spliced transcripts are often sp...
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry ...
BILDMED
2004
125views Algorithms» more  BILDMED 2004»
13 years 11 months ago
Fast and Accurate Interactive Image Segmentation in the GEOMAP Framework
Although many interactive segmentation methods exists, none can be considered a silver bullet for all clinical tasks. Moreover, incompatible data representations prevent multiple a...
Hans Meine, Ullrich Köthe, H. Siegfried Stieh...
BMCBI
2008
104views more  BMCBI 2008»
13 years 10 months ago
Missing value imputation improves clustering and interpretation of gene expression microarray data
Background: Missing values frequently pose problems in gene expression microarray experiments as they can hinder downstream analysis of the datasets. While several missing value i...
Johannes Tuikkala, Laura Elo, Olli Nevalainen, Ter...