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» Mining Complex Patterns from Protein Surfaces
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RECOMB
2002
Springer
14 years 8 months ago
Revealing protein structures: a new method for mapping antibody epitopes
A recent idea for determining the three-dimensional structure of a protein uses antibody recognition of surface structure and random peptide libraries to map antibody epitope comb...
Brendan Mumey, Brian W. Bailey, Edward A. Dratz
ISMB
2000
13 years 9 months ago
Towards a Systematics for Protein Subcellular Location: Quantitative Description of Protein Localization Patterns and Automated
Determination of the functions of all expressed proteins represents one of the major upcoming challenges in computational molecular biology. Since subcellular location plays a cru...
Robert F. Murphy, Michael V. Boland, Meel Velliste
BMCBI
2008
123views more  BMCBI 2008»
13 years 8 months ago
Functional module detection by functional flow pattern mining in protein interaction networks
eraction networks. In this abstract, we extend this approach by mining functional flow patterns for the purpose of detecting small-sized modules for specific functions. Methods Our...
Young-Rae Cho, Lei Shi, Aidong Zhang
ICDM
2009
IEEE
139views Data Mining» more  ICDM 2009»
13 years 5 months ago
Frequent Pattern Discovery from a Single Graph with Quantitative Itemsets
In this paper, we focus on a single graph whose vertices contain a set of quantitative attributes. Several networks can be naturally represented in this complex graph. An example i...
Yuuki Miyoshi, Tomonobu Ozaki, Takenao Ohkawa
PKDD
2004
Springer
135views Data Mining» more  PKDD 2004»
14 years 1 months ago
A Unified and Flexible Framework for Comparing Simple and Complex Patterns
One of the most important operations involving Data Mining patterns is computing their similarity. In this paper we present a general framework for comparing both simple and comple...
Ilaria Bartolini, Paolo Ciaccia, Irene Ntoutsi, Ma...