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» Mining Information for Functional Genomics
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SIGIR
2011
ACM
14 years 7 months ago
Pseudo test collections for learning web search ranking functions
Test collections are the primary drivers of progress in information retrieval. They provide a yardstick for assessing the effectiveness of ranking functions in an automatic, rapi...
Nima Asadi, Donald Metzler, Tamer Elsayed, Jimmy L...
BMCBI
2007
227views more  BMCBI 2007»
15 years 4 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
BMCBI
2008
126views more  BMCBI 2008»
15 years 4 months ago
Relating gene expression data on two-component systems to functional annotations in Escherichia coli
Background: Obtaining physiological insights from microarray experiments requires computational techniques that relate gene expression data to functional information. Traditionall...
Anne M. Denton, Jianfei Wu, Megan K. Townsend, Pre...
BMCBI
2005
121views more  BMCBI 2005»
15 years 4 months ago
Automated methods of predicting the function of biological sequences using GO and BLAST
Background: With the exponential increase in genomic sequence data there is a need to develop automated approaches to deducing the biological functions of novel sequences with hig...
Craig E. Jones, Ute Baumann, Alfred L. Brown
BMCBI
2007
140views more  BMCBI 2007»
15 years 4 months ago
From genes to functional classes in the study of biological systems
Background: With the popularisation of high-throughput techniques, the need for procedures that help in the biological interpretation of results has increased enormously. Recently...
Fátima Al-Shahrour, Leonardo Arbiza, Hern&a...