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» Mining Information for Functional Genomics
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BMCBI
2006
126views more  BMCBI 2006»
15 years 4 months ago
JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow
Background: Expressed sequence tag (EST) analyses provide a rapid and economical means to identify candidate genes that may be involved in a particular biological process. These E...
Mariano Latorre, Herman Silva, Juan Saba, Carito G...
ICDM
2010
IEEE
212views Data Mining» more  ICDM 2010»
15 years 2 months ago
Modeling Information Diffusion in Implicit Networks
Social media forms a central domain for the production and dissemination of real-time information. Even though such flows of information have traditionally been thought of as diffu...
Jaewon Yang, Jure Leskovec
144
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BMCBI
2007
122views more  BMCBI 2007»
15 years 4 months ago
Dissecting complex transcriptional responses using pathway-level scores based on prior information
Background: The genomewide pattern of changes in mRNA expression measured using DNA microarrays is typically a complex superposition of the response of multiple regulatory pathway...
Harmen J. Bussemaker, Lucas D. Ward, André ...
BMCBI
2008
138views more  BMCBI 2008»
15 years 4 months ago
Using neural networks and evolutionary information in decoy discrimination for protein tertiary structure prediction
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
Ching-Wai Tan, David T. Jones
BMCBI
2008
110views more  BMCBI 2008»
15 years 4 months ago
Enhancing the prediction of protein pairings between interacting families using orthology information
Background: It has repeatedly been shown that interacting protein families tend to have similar phylogenetic trees. These similarities can be used to predicting the mapping betwee...
José M. G. Izarzugaza, David de Juan, Carle...