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IJBRA
2007
80views more  IJBRA 2007»
13 years 10 months ago
On predicting secondary structure transition
A function of a protein is dependent on its structure; therefore, predicting a protein structure from an amino acid sequence is an active area of research. Optimally predicting a ...
Raja Loganantharaj, Vivek Philip
ACL
2008
13 years 11 months ago
MAXSIM: A Maximum Similarity Metric for Machine Translation Evaluation
We propose an automatic machine translation (MT) evaluation metric that calculates a similarity score (based on precision and recall) of a pair of sentences. Unlike most metrics, ...
Yee Seng Chan, Hwee Tou Ng
BMCBI
2007
168views more  BMCBI 2007»
13 years 10 months ago
Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks
Background: Uncovering cellular roles of a protein is a task of tremendous importance and complexity that requires dedicated experimental work as well as often sophisticated data ...
Nikolai Daraselia, Anton Yuryev, Sergei Egorov, Il...
SIGMOD
2004
ACM
88views Database» more  SIGMOD 2004»
14 years 10 months ago
Using Reasoning to Guide Annotation with Gene Ontology Terms in GOAT
High-quality annotation of biological data is central to bioinformatics. Annotation using terms from ontologies provides reliable computational access to data. The Gene Ontology (...
Michael Bada, Daniele Turi, Robin McEntire, Robert...
EDBT
2009
ACM
277views Database» more  EDBT 2009»
14 years 2 months ago
G-hash: towards fast kernel-based similarity search in large graph databases
Structured data including sets, sequences, trees and graphs, pose significant challenges to fundamental aspects of data management such as efficient storage, indexing, and simila...
Xiaohong Wang, Aaron M. Smalter, Jun Huan, Gerald ...