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BMCBI
2007
164views more  BMCBI 2007»
13 years 7 months ago
SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
Fathi Elloumi, Martha Nason
CIKM
2009
Springer
14 years 2 months ago
Independent informative subgraph mining for graph information retrieval
In order to enable scalable querying of graph databases, intelligent selection of subgraphs to index is essential. An improved index can reduce response times for graph queries si...
Bingjun Sun, Prasenjit Mitra, C. Lee Giles
BIBE
2007
IEEE
141views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Graph and Topological Structure Mining on Scientific Articles
In this paper, we investigate a new approach for literature mining. We use frequent subgraph mining, and its generalization topological structure mining, for finding interesting re...
Fan Wang, Ruoming Jin, Gagan Agrawal, Helen Piontk...
IFIP12
2007
13 years 9 months ago
Clustering Improves the Exploration of Graph Mining Results
Mining frequent subgraphs is an area of research where we have a given set of graphs, and where we search for (connected) subgraphs contained in many of these graphs. Each graph ca...
Edgar H. de Graaf, Joost N. Kok, Walter A. Kosters
PPOPP
2010
ACM
14 years 4 months ago
A distributed placement service for graph-structured and tree-structured data
Effective data placement strategies can enhance the performance of data-intensive applications implemented on high end computing clusters. Such strategies can have a significant i...
Gregory Buehrer, Srinivasan Parthasarathy, Shirish...