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BMCBI
2005
108views more  BMCBI 2005»
13 years 8 months ago
Storing, linking, and mining microarray databases using SRS
Background: SRS (Sequence Retrieval System) has proven to be a valuable platform for storing, linking, and querying biological databases. Due to the availability of a broad range ...
Antoine Veldhoven, Don de Lange, Marcel Smid, Vict...
JMLR
2008
209views more  JMLR 2008»
13 years 8 months ago
Bayesian Inference and Optimal Design for the Sparse Linear Model
The linear model with sparsity-favouring prior on the coefficients has important applications in many different domains. In machine learning, most methods to date search for maxim...
Matthias W. Seeger
BMCBI
2007
179views more  BMCBI 2007»
13 years 8 months ago
Gene selection with multiple ordering criteria
Background: A microarray study may select different differentially expressed gene sets because of different selection criteria. For example, the fold-change and p-value are two co...
James J. Chen, Chen-An Tsai, ShengLi Tzeng, Chun-H...
BMCBI
2010
121views more  BMCBI 2010»
13 years 3 months ago
G-stack modulated probe intensities on expression arrays - sequence corrections and signal calibration
Background: The brightness of the probe spots on expression microarrays intends to measure the abundance of specific mRNA targets. Probes with runs of at least three guanines (G) ...
Mario Fasold, Peter F. Stadler, Hans Binder
BMCBI
2005
145views more  BMCBI 2005»
13 years 8 months ago
CAGER: classification analysis of gene expression regulation using multiple information sources
Background: Many classification approaches have been applied to analyzing transcriptional regulation of gene expressions. These methods build models that can explain a gene's...
Jianhua Ruan, Weixiong Zhang