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RECOMB
2007
Springer
14 years 9 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss
RECOMB
2005
Springer
14 years 9 months ago
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
Sing-Hoi Sze, Xiaoyan Zhao
RECOMB
2002
Springer
14 years 9 months ago
Comparison of minisatellites
In the class of repeated sequences that occur in DNA, minisatellites have been found polymorphic and became useful tools in genetic mapping and forensic studies. They consist of a...
Eric Rivals, Sèverine Bérard
STOC
2005
ACM
135views Algorithms» more  STOC 2005»
14 years 9 months ago
Quadratic forms on graphs
We introduce a new graph parameter, called the Grothendieck constant of a graph G = (V, E), which is defined as the least constant K such that for every A : E R, sup f:V S|V |-1 ...
Noga Alon, Konstantin Makarychev, Yury Makarychev,...
ICALP
2009
Springer
14 years 9 months ago
Annotations in Data Streams
The central goal of data stream algorithms is to process massive streams of data using sublinear storage space. Motivated by work in the database community on outsourcing database...
Amit Chakrabarti, Graham Cormode, Andrew McGregor
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