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BMCBI
2010
167views more  BMCBI 2010»
13 years 6 months ago
BisoGenet: a new tool for gene network building, visualization and analysis
Background: The increasing availability and diversity of omics data in the post-genomic era offers new perspectives in most areas of biomedical research. Graph-based biological ne...
Alexander Martin, Maria Elena Ochagavia, Laya C. R...
BMCBI
2008
200views more  BMCBI 2008»
13 years 6 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
ICPPW
2009
IEEE
13 years 4 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
BMCBI
2008
93views more  BMCBI 2008»
13 years 6 months ago
Using iterative cluster merging with improved gap statistics to perform online phenotype discovery in the context of high-throug
Background: The recent emergence of high-throughput automated image acquisition technologies has forever changed how cell biologists collect and analyze data. Historically, the in...
Zheng Yin, Xiaobo Zhou, Chris Bakal, Fuhai Li, You...
PKDD
2009
Springer
134views Data Mining» more  PKDD 2009»
14 years 1 months ago
Multi-task Feature Selection Using the Multiple Inclusion Criterion (MIC)
Abstract. We address the problem of joint feature selection in multiple related classification or regression tasks. When doing feature selection with multiple tasks, usually one c...
Paramveer S. Dhillon, Brian Tomasik, Dean P. Foste...