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» Modelling Gene Regulatory Networks
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ICONIP
2004
14 years 8 days ago
Modeling Gene Regulatory Network in Fission Yeast Cell Cycle Using Hybrid Petri Nets
The complexity of gene regulatory network models stems from the fact that the models should be able to represent continuous, discrete as well as stochastic aspects of gene regulati...
Ranjith Vasireddy, Somenath Biswas
CEC
2008
IEEE
14 years 5 months ago
Toward a gene regulatory network model for evolving chemotaxis behavior
— Inspired from bacteria, a gene regulatory network model for signal transduction is presented in this paper. After describing experiments on stabilizing the population size for ...
Neale Samways, Yaochu Jin, Xin Yao, Bernhard Sendh...
IJDMB
2011
129views more  IJDMB 2011»
13 years 2 months ago
Modelling gene and protein regulatory networks with Answer Set Programming
: Recently, many approaches to model regulatory networks have been proposed in the systems biology domain, however the task is far from being solved. In this paper we propose an an...
Timur Fayruzov, Jeroen Janssen, Dirk Vermeir, Chri...
BMCBI
2007
167views more  BMCBI 2007»
13 years 11 months ago
A stochastic differential equation model for transcriptional regulatory networks
Background: This work explores the quantitative characteristics of the local transcriptional regulatory network based on the availability of time dependent gene expression data se...
Adriana Climescu-Haulica, Michelle D. Quirk
NN
2007
Springer
267views Neural Networks» more  NN 2007»
13 years 10 months ago
Modeling of gene regulatory networks with hybrid differential evolution and particle swarm optimization
In the last decade, recurrent neural networks (RNNs) have attracted more efforts in inferring genetic regulatory networks (GRNs), using time series gene expression data from micro...
Rui Xu, Ganesh K. Venayagamoorthy, Donald C. Wunsc...