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» Modelling the Interpretation of Novel Compounds
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SIGMOD
2004
ACM
162views Database» more  SIGMOD 2004»
14 years 8 months ago
Graph Indexing: A Frequent Structure-based Approach
Graph has become increasingly important in modelling complicated structures and schemaless data such as proteins, chemical compounds, and XML documents. Given a graph query, it is...
Xifeng Yan, Philip S. Yu, Jiawei Han
BIBM
2009
IEEE
206views Bioinformatics» more  BIBM 2009»
14 years 3 months ago
Application of Kernel Functions for Accurate Similarity Search in Large Chemical Databases
Background: Similaritysearch in chemical structure databases is an important problem with many applications in chemical genomics, drug design, and efficient chemical probe screeni...
Xiaohong Wang, Jun Huan, Aaron M. Smalter, Gerald ...
DASFAA
2008
IEEE
188views Database» more  DASFAA 2008»
14 years 3 months ago
Summarization Graph Indexing: Beyond Frequent Structure-Based Approach
Graph is an important data structure to model complex structural data, such as chemical compounds, proteins, and XML documents. Among many graph data-based applications, sub-graph ...
Lei Zou, Lei Chen 0002, Huaming Zhang, Yansheng Lu...
BMCBI
2007
145views more  BMCBI 2007»
13 years 8 months ago
Colony size measurement of the yeast gene deletion strains for functional genomics
Background: Numerous functional genomics approaches have been developed to study the model organism yeast, Saccharomyces cerevisiae, with the aim of systematically understanding t...
Negar Memarian, Matthew Jessulat, Javad Alirezaie,...
JCB
2008
91views more  JCB 2008»
13 years 8 months ago
Computational Quantification of Peptides from LC-MS Data
Liquid chromatography coupled to mass spectrometry (LC-MS) has become a major tool for the study of biological processes. High-throughput LC-MS experiments are frequently conducte...
Ole Schulz-Trieglaff, Rene Hussong, Clemens Gr&oum...