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» Models and Methods in Comparative Genomics
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BMCBI
2008
138views more  BMCBI 2008»
13 years 10 months ago
Inference of haplotypic phase and missing genotypes in polyploid organisms and variable copy number genomic regions
Background: The power of haplotype-based methods for association studies, identification of regions under selection, and ancestral inference, is well-established for diploid organ...
Shu-Yi Su, Jonathan White, David J. Balding, Lachl...
KES
2008
Springer
13 years 8 months ago
Classification of Sporadic and BRCA1 Ovarian Cancer Based on a Genome-Wide Study of Copy Number Variations
Abstract. Motivation: Although studies have shown that genetic alterations are causally involved in numerous human diseases, still not much is known about the molecular mechanisms ...
Anneleen Daemen, Olivier Gevaert, Karin Leunen, Va...
IMSCCS
2006
IEEE
14 years 3 months ago
GenomeBlast: A Web Tool for Small Genome Comparison
Comparative genomics has become an essential approach for identifying homologous gene candidates and their functions, and for studying genome evolution. We developed GenomeBlast, ...
Guoqing Lu, Liying Jiang, Resa M. Kotalik, Thaine ...
BMCBI
2007
100views more  BMCBI 2007»
13 years 10 months ago
PARE: A tool for comparing protein abundance and mRNA expression data
Background: Techniques for measuring protein abundance are rapidly advancing and we are now in a situation where we anticipate many protein abundance data sets will be available i...
Eric Z. Yu, Anne E. Counterman Burba, Mark Gerstei...
TREC
2007
13 years 11 months ago
Language Models for Genomics Information Retrieval: UIUC at TREC 2007 Genomics Track
The University of Illinois at Urbana-Champaign (UIUC) participated in TREC 2007 Genomics Track. Our general goal of participation is to apply language modelbased approaches to the...
Yue Lu, Jing Jiang, Xu Ling, Xin He, ChengXiang Zh...