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» Models and Methods in Comparative Genomics
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ISMB
1996
14 years 8 days ago
The Mathematical Model of Subtractive Hybridization and Its Practical Application
A novel theory of subtractive hybridization including (or based on) the kinetic model of this process was proposed. A computer program modeling the process of subtraction wasdevel...
Olga D. Ermolaeva, Sergey A. Lukyanov, Eugene D. S...
AUTOMATICA
2010
99views more  AUTOMATICA 2010»
13 years 11 months ago
Two nonlinear optimization methods for black box identification compared
: In this paper, two nonlinear optimization methods for the identification of nonlinear systems are compared. Both methods estimate all the parameters of a polynomial nonlinear sta...
Anne Van Mulders, Johan Schoukens, Marnix Volckaer...
BMCBI
2005
178views more  BMCBI 2005»
13 years 11 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
BMCBI
2010
152views more  BMCBI 2010»
13 years 11 months ago
Comparative study of discretization methods of microarray data for inferring transcriptional regulatory networks
Background: Microarray data discretization is a basic preprocess for many algorithms of gene regulatory network inference. Some common discretization methods in informatics are us...
Yong Li, Lili Liu, Xi Bai, Hua Cai, Wei Ji, Dianji...
BMCBI
2008
166views more  BMCBI 2008»
13 years 11 months ago
Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies
Background: The analysis of large-scale data sets via clustering techniques is utilized in a number of applications. Biclustering in particular has emerged as an important problem...
Peter A. DiMaggio Jr., Scott R. McAllister, Christ...