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RECOMB
2002
Springer
14 years 9 months ago
Probabilistic hierarchical clustering for biological data
Biological data, such as gene expression profiles or protein sequences, is often organized in a hierarchy of classes, where the instances assigned to "nearby" classes in...
Eran Segal, Daphne Koller
PARELEC
2006
IEEE
14 years 3 months ago
MPI and Non-MPI Simulations for Epitaxial Surface Growth
Usually, theories of surface growth are based on the study of global processes without taking in account the local behaviour of atoms. We have implemented two Montecarlo simulation...
Carmen B. Navarrete, Susana Holgado, Eloy Anguiano
BMCBI
2007
128views more  BMCBI 2007»
13 years 9 months ago
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand bindin
Background: An accurate description of protein shape derived from protein structure is necessary to establish an understanding of protein-ligand interactions, which in turn will l...
Lei Xie, Philip E. Bourne
CVPR
2012
IEEE
11 years 11 months ago
A learning-based framework for depth ordering
Depth ordering is instrumental for understanding the 3D geometry of an image. We as humans are surprisingly good ordering even with abstract 2D line drawings. In this paper we pro...
Zhaoyin Jia, Andrew C. Gallagher, Yao-Jen Chang, T...
BMCBI
2008
111views more  BMCBI 2008»
13 years 9 months ago
GENOMEPOP: A program to simulate genomes in populations
Background: There are several situations in population biology research where simulating DNA sequences is useful. Simulation of biological populations under different evolutionary...
Antonio Carvajal-Rodríguez