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» Modernizing Existing Software: A Case Study
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BMCBI
2005
123views more  BMCBI 2005»
13 years 8 months ago
PSI-BLAST-ISS: an intermediate sequence search tool for estimation of the position-specific alignment reliability
Background: Protein sequence alignments have become indispensable for virtually any evolutionary, structural or functional study involving proteins. Modern sequence search and com...
Mindaugas Margelevicius, Ceslovas Venclovas
IPPS
2007
IEEE
14 years 2 months ago
A Comprehensive Analysis of OpenMP Applications on Dual-Core Intel Xeon SMPs
Hybrid chip multithreaded SMPs present new challenges as well as new opportunities to maximize performance. Our intention is to discover the optimal operating configuration of suc...
Ryan E. Grant, Ahmad Afsahi
GLVLSI
2005
IEEE
85views VLSI» more  GLVLSI 2005»
14 years 2 months ago
VLSI CAD tool protection by birthmarking design solutions
Many techniques have been proposed in the past for the protection of VLSI design IPs (intellectual property). CAD tools and algorithms are intensively used in all phases of modern...
Lin Yuan, Gang Qu, Ankur Srivastava
ICCD
2001
IEEE
103views Hardware» more  ICCD 2001»
14 years 5 months ago
Fixed-outline Floorplanning through Better Local Search
Classical floorplanning minimizes a linear combination of area and wirelength. When Simulated Annealing is used, e.g., with the Sequence Pair representation, the typical choice o...
Saurabh N. Adya, Igor L. Markov
CLUSTER
2007
IEEE
14 years 2 months ago
Performance analysis of a user-level memory server
Abstract—Large-scale parallel applications often produce immense quantities of data that need to be analyzed. To avoid performing repeated, costly disk accesses, analysis of larg...
Scott Pakin, Greg Johnson