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» Modular Complexity Analysis via Relative Complexity
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BMCBI
2007
100views more  BMCBI 2007»
13 years 10 months ago
PARE: A tool for comparing protein abundance and mRNA expression data
Background: Techniques for measuring protein abundance are rapidly advancing and we are now in a situation where we anticipate many protein abundance data sets will be available i...
Eric Z. Yu, Anne E. Counterman Burba, Mark Gerstei...
BMCBI
2008
140views more  BMCBI 2008»
13 years 10 months ago
GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations
Background: The most renowned biological ontology, Gene Ontology (GO) is widely used for annotations of genes and gene products of different organisms. However, there are shortcom...
Qingwei Xu, Yixiang Shi, Qiang Lu, Guo-qing Zhang,...
BMCBI
2004
149views more  BMCBI 2004»
13 years 10 months ago
MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
Background: Information obtained by DNA microarray technology gives a rough snapshot of the transcriptome state, i.e., the expression level of all the genes expressed in a cell po...
Gaëlle Lelandais, Philippe Marc, Pierre Vince...
ICDE
2009
IEEE
159views Database» more  ICDE 2009»
14 years 12 months ago
Sketch-Based Summarization of Ordered XML Streams
XML streams, such as RSS feeds or complex event streams, are becoming increasingly pervasive as they provide the foundation for a wide range of emerging applications. An important...
Veronica Mayorga, Neoklis Polyzotis
SPAA
2009
ACM
14 years 10 months ago
Routing without ordering
We analyze the correctness and complexity of two well-known routing algorithms, introduced by Gafni and Bertsekas (1981): By reversing the directions of some edges, these algorith...
Bernadette Charron-Bost, Antoine Gaillard, Jennife...