Sciweavers

796 search results - page 8 / 160
» Molecular Surface Abstraction
Sort
View
EUROGP
2004
Springer
14 years 1 months ago
Constrained Molecular Dynamics as a Search and Optimization Tool
Abstract. In this paper we consider a new class of search and optimization algorithms inspired by molecular dynamics simulations in physics.
Riccardo Poli, Christopher R. Stephens
JSC
2007
77views more  JSC 2007»
13 years 8 months ago
Mathscape and molecular integrals
Abstract: This note describes the current reimplementation of mathscape that supports all the calculations in my paper ”Mathscapeand Molecular Integrals”.
Michael P. Barnett
ICCABS
2011
13 years 4 days ago
Towards accelerating molecular modeling via multi-scale approximation on a GPU
—Research efforts to analyze biomolecular properties contribute towards our understanding of biomolecular function. Calculating non-bonded forces (or in our case, electrostatic s...
Mayank Daga, Wu-chun Feng, Thomas Scogland
SIAMSC
2011
113views more  SIAMSC 2011»
13 years 2 months ago
An Efficient Higher-Order Fast Multipole Boundary Element Solution for Poisson-Boltzmann-Based Molecular Electrostatics
In order to compute polarization energy of biomolecules, we describe a boundary element approach to solving the linearized Poisson–Boltzmann equation. Our approach combines sever...
Chandrajit L. Bajaj, Shun-Chuan Albert Chen, Alexa...
JCC
2006
67views more  JCC 2006»
13 years 8 months ago
Heuristic molecular lipophilicity potential (HMLP): Lipophilicity and hydrophilicity of amino acid side chains
: Heuristic molecular lipophilicity potential (HMLP) is applied in the study of lipophilicity and hydrphilcity of 20 natural amino acids side chains. The HMLP parameters, surface a...
Qishi Du, Da-Peng Li, Wen-Zhang He, Kuo-Chen Chou