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TCBB
2008
82views more  TCBB 2008»
13 years 7 months ago
Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops
Two efficient and complementary sampling algorithms are presented to explore the space of closed clash-free conformations of a flexible protein loop. The "seed sampling" ...
Peggy Yao, Ankur Dhanik, Nathan Marz, Ryan Propper...
IJDMB
2006
90views more  IJDMB 2006»
13 years 7 months ago
An efficient motif discovery algorithm with unknown motif length and number of binding sites
: Most motif discovery algorithms from DNA sequences require the motif's length as input. Styczynski et al. introduced the Extended (l,d)-Motif Problem (EMP) where the motif&#...
Henry C. M. Leung, Francis Y. L. Chin
IJIS
2008
42views more  IJIS 2008»
13 years 7 months ago
An efficient triplet-based algorithm for evidential reasoning
Linear-time computational techniques have been developed for combining evidence which is available on a number of contending hypotheses. They offer a means of making the computati...
Yaxin Bi
JNW
2006
98views more  JNW 2006»
13 years 7 months ago
Efficient Distributed Algorithm for RWA Using Path Protection
A number of Integer Linear Program (ILP) formulations for both static and dynamic lightpath allocation have been proposed, for the design of survivable WDM networks. However, such ...
Arunita Jaekel, Ying Chen
DAC
1996
ACM
13 years 11 months ago
Efficient Approximation Algorithms for Floorplan Area Minimization
Approximation has been shown to be an eective method for reducing the time and space costs of solving various oorplan area minimization problems. In this paper, we present several...
Danny Z. Chen, Xiaobo Hu