Sciweavers

461 search results - page 14 / 93
» Motif patterns in 2D
Sort
View
BMCBI
2008
99views more  BMCBI 2008»
13 years 7 months ago
NestedMICA as an ab initio protein motif discovery tool
Background: Discovering overrepresented patterns in amino acid sequences is an important step in protein functional element identification. We adapted and extended NestedMICA, an ...
Mutlu Dogruel, Thomas A. Down, Tim J. P. Hubbard
KDD
2007
ACM
168views Data Mining» more  KDD 2007»
14 years 8 months ago
Detecting time series motifs under uniform scaling
Time series motifs are approximately repeated patterns found within the data. Such motifs have utility for many data mining algorithms, including rule-discovery, novelty-detection...
Dragomir Yankov, Eamonn J. Keogh, Jose Medina, Bil...
MVA
2007
13 years 9 months ago
Periodic Pattern Inspection Using Convolution Masks
A two-dimensional (2-D) convolution mask is proposed for detecting the location of irregularities and defects in a periodic two-dimensional signal or image. In this approach, defe...
Y. S. Weng, Ming-Hwei Perng
BMCBI
2007
114views more  BMCBI 2007»
13 years 7 months ago
False occurrences of functional motifs in protein sequences highlight evolutionary constraints
Background: False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a nume...
Allegra Via, Pier Federico Gherardini, Enrico Ferr...
ALMOB
2006
138views more  ALMOB 2006»
13 years 7 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh