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RECOMB
2004
Springer
14 years 7 months ago
Structured motifs search
In this paper we describe an algorithm for the localization of structured models, i.e. sequences of (simple) motifs and distance constraints. It basically combines standard patter...
Alberto Policriti, Nicola Vitacolonna, Michele Mor...
ICPR
2000
IEEE
13 years 12 months ago
Piecewise Linear Two-Dimensional Warping
A new efficient dynamic programming (DP) algorithm for 2D elastic matching is proposed. The present DP algorithm requires by far less complexity than previous DPbased elastic mat...
Seiichi Uchida, Hiroaki Sakoe
ESANN
2008
13 years 9 months ago
Discrimination of regulatory DNA by SVM on the basis of over- and under-represented motifs
In this paper we apply three pattern recognition methods (support vector machine, cluster analysis and principal component analysis) to distinguish regulatory regions from coding a...
Rene te Boekhorst, Irina I. Abnizova, Lorenz Werni...
ISCA
2012
IEEE
270views Hardware» more  ISCA 2012»
11 years 10 months ago
Revisiting hardware-assisted page walks for virtualized systems
Recent improvements in architectural supports for virtualization have extended traditional hardware page walkers to traverse nested page tables. However, current twodimensional (2...
Jeongseob Ahn, Seongwook Jin, Jaehyuk Huh
BMCBI
2008
108views more  BMCBI 2008»
13 years 7 months ago
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
Background: Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior cla...
Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arl...