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EVOW
2004
Springer
13 years 11 months ago
Evolving Regular Expression-Based Sequence Classifiers for Protein Nuclear Localisation
A number of bioinformatics tools use regular expression (RE) matching to locate protein or DNA sequence motifs that have been discovered by researchers in the laboratory. For exam...
Amine Heddad, Markus Brameier, Robert M. MacCallum
BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
Background: Gene clustering has been widely used to group genes with similar expression pattern in microarray data analysis. Subsequent enrichment analysis using predefined gene s...
Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong ...
IMSCCS
2006
IEEE
14 years 1 months ago
Identification of New Members of Hydrophobin Family Using Primary Structure Analysis
Background: Hydrophobins are fungal proteins that can turn into amphipathic membranes at hydrophilic/hydrophobic interfaces by self-assembly. The assemblages by Class I hydrophobi...
Kuan Yang, Youping Deng, Chaoyang Zhang, Mohamed O...
ENTCS
2008
109views more  ENTCS 2008»
13 years 7 months ago
Spatial Networks of Hybrid I/O Automata for Modeling Excitable Tissue
We propose a new biological framework, spatial networks of hybrid input/output automata (SNHIOA), for the efficient modeling and simulation of excitable-cell tissue. Within this f...
Ezio Bartocci, Flavio Corradini, Maria Rita Di Ber...
SSPR
2004
Springer
14 years 29 days ago
Matching Concavity Trees
Concavity trees are structures for 2-D shape representation. In this paper, we present a new recursive method for concavity tree matching that returns the distance between two attr...
Ossama El Badawy, Mohamed Kamel