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BMCBI
2008
128views more  BMCBI 2008»
13 years 11 months ago
Validation of an NSP-based (negative selection pattern) gene family identification strategy
Background: Gene family identification from ESTs can be a valuable resource for analysis of genome evolution but presents unique challenges in organisms for which the entire genom...
Ronald L. Frank, Cyriac Kandoth, Fikret Erç...
BMCBI
2006
182views more  BMCBI 2006»
13 years 11 months ago
A database and tool, IM Browser, for exploring and integrating emerging gene and protein interaction data for Drosophila
Background: Biological processes are mediated by networks of interacting genes and proteins. Efforts to map and understand these networks are resulting in the proliferation of int...
Svetlana Pacifico, Guozhen Liu, Stephen Guest, Jod...
BMCBI
2006
95views more  BMCBI 2006»
13 years 11 months ago
XcisClique: analysis of regulatory bicliques
Background: Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs si...
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. H...
BMCBI
2007
167views more  BMCBI 2007»
13 years 11 months ago
A stochastic differential equation model for transcriptional regulatory networks
Background: This work explores the quantitative characteristics of the local transcriptional regulatory network based on the availability of time dependent gene expression data se...
Adriana Climescu-Haulica, Michelle D. Quirk
IJNSEC
2006
132views more  IJNSEC 2006»
13 years 10 months ago
Alert Correlation for Extracting Attack Strategies
Alert correlation is an important technique for managing large the volume of intrusion alerts that are raised by heterogenous Intrusion Detection Systems (IDSs). The recent trend ...
Bin Zhu, Ali A. Ghorbani