Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
Mining frequent subgraphs is an area of research where we have a given set of graphs, and where we search for (connected) subgraphs contained in many of these graphs. Each graph ca...
Edgar H. de Graaf, Joost N. Kok, Walter A. Kosters
Background: Many real networks can be understood as two complementary networks with two kind of nodes. This is the case of metabolic networks where the first network has chemical ...
Jose C. Nacher, Nobuhisa Ueda, Takuji Yamada, Mino...
Vectors [Extended Abstract] Pekka Orponen and Satu Elisa Schaeffer Laboratory for Theoretical Computer Science, P.O. Box 5400 FI-02015 TKK Helsinki University of Technology, Finlan...
We propose a new method for solving structured CSPs which generalizes and improves the Cyclic-Clustering approach [4]. First, the cutset and the tree-decomposition of the constrai...