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» Multiple Comparisons in Induction Algorithms
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NIPS
2004
13 years 8 months ago
Probabilistic Inference of Alternative Splicing Events in Microarray Data
Alternative splicing (AS) is an important and frequent step in mammalian gene expression that allows a single gene to specify multiple products, and is crucial for the regulation ...
Ofer Shai, Brendan J. Frey, Quaid Morris, Qun Pan,...
BMCBI
2010
99views more  BMCBI 2010»
13 years 7 months ago
Shared probe design and existing microarray reanalysis using PICKY
Background: Large genomes contain families of highly similar genes that cannot be individually identified by microarray probes. This limitation is due to thermodynamic restriction...
Hui-Hsien Chou
DC
2008
13 years 7 months ago
Fast computation by population protocols with a leader
Fast algorithms are presented for performing computations in a probabilistic population model. This is a variant of the standard population protocol model--in which finite-state ag...
Dana Angluin, James Aspnes, David Eisenstat
BMCBI
2006
166views more  BMCBI 2006»
13 years 7 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
BMCBI
2007
166views more  BMCBI 2007»
13 years 7 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour