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» Multiple Sequence Alignment using Fuzzy Logic
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BMCBI
2007
117views more  BMCBI 2007»
13 years 7 months ago
Supervised multivariate analysis of sequence groups to identify specificity determining residues
Background: Proteins that evolve from a common ancestor can change functionality over time, and it is important to be able identify residues that cause this change. In this paper ...
Iain M. Wallace, Desmond G. Higgins
BMCBI
2006
108views more  BMCBI 2006»
13 years 7 months ago
RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits
Background: Until today, analysis of 16S ribosomal RNA (rRNA) sequences has been the de-facto gold standard for the assessment of phylogenetic relationships among prokaryotes. How...
Hanno Teeling, Frank Oliver Glöckner
FUZZIEEE
2007
IEEE
14 years 1 months ago
A Genetic-Fuzzy Mining Approach for Items with Multiple Minimum Supports
—In the past, we proposed a genetic-fuzzy data-mining algorithm for extracting both association rules and membership functions from quantitative transactions under a single minim...
Chun-Hao Chen, Tzung-Pei Hong, Vincent S. Tseng, C...
FUZZIEEE
2007
IEEE
14 years 1 months ago
Decoding Trace Peak Behaviour - A Neuro-Fuzzy Approach
— DNA sequence basecalling is commonly regarded as a solved problem, despite significant error rates being reflected in inaccuracies in databases and genome annotations. This has...
David Thornley, Stavros Petridis
RECOMB
2003
Springer
14 years 8 months ago
A multi-expert system for the automatic detection of protein domains from sequence information
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...
Niranjan Nagarajan, Golan Yona