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» Multiple Sequence Alignment using Fuzzy Logic
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FSKD
2011
Springer
313views Fuzzy Logic» more  FSKD 2011»
12 years 7 months ago
Robust initialization for reasoning procedures in a hierarchical heterogeneous knowledge-base
—This paper describes a model of a hierarchical, heterogeneous knowledge-base. The proposed model consists of an associative level that is implemented by a Kanerva-like sparse di...
Slobodan Ribaric, Darijan Marcetic, Zongmin Ma
BMCBI
2010
133views more  BMCBI 2010»
13 years 7 months ago
Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction
Background: With the rapid expansion of DNA sequencing databases, it is now feasible to identify relevant information from prior sequencing projects and completed genomes and appl...
Lance E. Palmer, Mathäus Dejori, Randall A. B...
BMCBI
2008
86views more  BMCBI 2008»
13 years 7 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
RECOMB
2006
Springer
14 years 8 months ago
Detecting the Dependent Evolution of Biosequences
Abstract. A probabilistic graphical model is developed in order to detect the dependent evolution between different sites in biological sequences. Given a multiple sequence alignme...
Jeremy Darot, Chen-Hsiang Yeang, David Haussler
FOIKS
2008
Springer
13 years 9 months ago
Towards a Fuzzy Logic for Automated Multi-issue Negotiation
Abstract. We present a novel logic-based approach to automate multi-issue bilateral negotiation in e-marketplaces. In such frameworks issues to negotiate on can be multiple, interr...
Azzurra Ragone, Umberto Straccia, Tommaso Di Noia,...