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» Multiple Sequence Alignment using Fuzzy Logic
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RECOMB
2004
Springer
14 years 8 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
BMCBI
2005
100views more  BMCBI 2005»
13 years 7 months ago
Scoredist: A simple and robust protein sequence distance estimator
Background: Distance-based methods are popular for reconstructing evolutionary trees thanks to their speed and generality. A number of methods exist for estimating distances from ...
Erik L. L. Sonnhammer, Volker Hollich
ICASSP
2011
IEEE
12 years 11 months ago
Iterative estimation of structures of multiple RNA homologs: Turbofold
TurboFold, an iterative algorithm for estimating the common secondary structures of multiple RNA homologs, is presented. The algorithm is motivated by and has structure and attrib...
Gaurav Sharma, Arif Ozgun Harmanci, David H. Mathe...
FSKD
2007
Springer
354views Fuzzy Logic» more  FSKD 2007»
14 years 1 months ago
Using Fuzzy-Word Correlation Factors to Compute Document Similarity Based on Phrase Matching
One of the Web information Retrieval (IR) problems these days is to identify redundant information that exist in (replicated) Web documents. These documents can easily be found in...
Jun won Lee, Yiu-Kai Ng
CVPR
2009
IEEE
15 years 2 months ago
Learning sign language by watching TV (using weakly aligned subtitles)
The goal of this work is to automatically learn a large number of British Sign Language (BSL) signs from TV broadcasts. We achieve this by using the supervisory information avai...
Patrick Buehler (University of Oxford), Mark Everi...