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    BMCBI
    2007
    153views more  BMCBI 2007»
    Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
    13 years 11 months ago
    Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
    Download  www.biomedcentral.com
    Background: In ribonucleic acid (RNA) molecules whose function depends on their final, folded three-dimensional shape (such as those in ribosomes or spliceosome complexes), the se...
    Amelia B. Bellamy-Royds, Marcel Turcotte
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    ICANNGA
    2007
    Springer
    112views Algorithms» more  ICANNGA 2007»
    Multiple Sequence Alignment with Evolutionary-Progressive Method
    14 years 5 months ago
    Multiple Sequence Alignment with Evolutionary-Progressive Method
    Download  www.mini.pw.edu.pl
    A new evolutionary-progressive method for Multiple Sequence Alignment problem is proposed. The method efficiently combines flexibility of evolutionary approach with speed and accu...
    Pawel Kupis, Jacek Mandziuk
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    WILF
    2007
    Springer
    170views Fuzzy Logic» more  WILF 2007»
    Time-Series Alignment by Non-negative Multiple Generalized Canonical Correlation Analysis
    14 years 5 months ago
    Time-Series Alignment by Non-negative Multiple Generalized Canonical Correlation Analysis
    Download  www.biomedcentral.com
    Background: Quantitative analysis of differential protein expressions requires to align temporal elution measurements from liquid chromatography coupled to mass spectrometry (LC/M...
    Bernd Fischer, Volker Roth, Joachim M. Buhmann
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    BMCBI
    2007
    126views more  BMCBI 2007»
    Multiple non-collinear TF-map alignments of promoter regions
    13 years 11 months ago
    Multiple non-collinear TF-map alignments of promoter regions
    Download  www.biomedcentral.com
    Background: The analysis of the promoter sequence of genes with similar expression patterns is a basic tool to annotate common regulatory elements. Multiple sequence alignments ar...
    Enrique Blanco, Roderic Guigó, Xavier Messe...
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    NAR
    2006
    119views more  NAR 2006»
    HHsenser: exhaustive transitive profile search using HMM-HMM comparison
    13 years 11 months ago
    HHsenser: exhaustive transitive profile search using HMM-HMM comparison
    Download  www.eb.tuebingen.mpg.de
    HHsenser is the first server to offer exhaustive intermediate profile searches, which it combines with pairwise comparison of hidden Markov models. Starting from a single protein ...
    Johannes Söding, Michael Remmert, Andreas Bie...
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