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BMCBI
2010
64views more  BMCBI 2010»
13 years 11 months ago
State of the art: refinement of multiple sequence alignments
Correction to Chakrabarti S, Lanczycki CJ, Panchenko AR, Przytycka TM, Thiessen PA and Bryant SH: State of the art: refinement of multiple sequence alignments. BMC Bioinformatics ...
Saikat Chakrabarti, Christopher J. Lanczycki, Anna...
ACL
2004
14 years 10 days ago
Experiments in parallel-text based grammar induction
This paper discusses the use of statistical word alignment over multiple parallel texts for the identification of string spans that cannot be constituents in one of the languages....
Jonas Kuhn
CIKM
2008
Springer
14 years 28 days ago
Pairwise statistical significance of local sequence alignment using multiple parameter sets
Background: Accurate estimation of statistical significance of a pairwise alignment is an important problem in sequence comparison. Recently, a comparative study of pairwise stati...
Ankit Agrawal, Xiaoqiu Huang
ALMOB
2008
160views more  ALMOB 2008»
13 years 11 months ago
Syntenator: Multiple gene order alignments with a gene-specific scoring function
Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
Christian Rödelsperger, Christoph Dieterich
BMCBI
2010
118views more  BMCBI 2010»
13 years 11 months ago
Towards realistic benchmarks for multiple alignments of non-coding sequences
Background: With the continued development of new computational tools for multiple sequence alignment, it is necessary today to develop benchmarks that aid the selection of the mo...
Jaebum Kim, Saurabh Sinha