3877 search results - page 3 / 776 » Multiple alignment by aligning alignments |
CSB
2005
IEEE
14 years 1 months ago
2005
IEEE
We present TreeRefiner, a tool for refining multiple alignments of biological sequences. Given a multiple alignment, a phylogenetic tree, and scoring parameters as input, TreeRefi...
BMCBI
2005
13 years 7 months ago
2005
Background: Alignments of homologous DNA sequences are crucial for comparative genomics and phylogenetic analysis. However, multiple alignment represents a computationally difficu...
CJ
2008
13 years 7 months ago
2008
The article surveys parameterized algorithms and complexities for computational tasks on biopolymer sequences, including the problems of longest common subsequence, shortest commo...
BMCBI
2007
13 years 7 months ago
2007
Motivation: The quality of progressive sequence alignments strongly depends on the accuracy of the individual pairwise alignment steps since gaps that are introduced at one step c...
CSB
2004
IEEE
13 years 11 months ago
2004
IEEE
RNA structures can be viewed as a kind of special strings with some characters bonded with each other. The question of aligning two RNA structures has been studied for a while, an...