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» Multiple alignment by aligning alignments
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RECOMB
2003
Springer
14 years 11 months ago
Accurate detection of very sparse sequence motifs
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...
Andreas Heger, Michael Lappe, Liisa Holm
LREC
2010
209views Education» more  LREC 2010»
14 years 13 days ago
Lingua-Align: An Experimental Toolbox for Automatic Tree-to-Tree Alignment
In this paper we present an experimental toolbox for automatic tree-to-tree alignment based on local classification and alignment inference. The aligner implements a recurrent arc...
Jörg Tiedemann
RECOMB
2006
Springer
14 years 11 months ago
Simple and Fast Inverse Alignment
For as long as biologists have been computing alignments of sequences, the question of what values to use for scoring substitutions and gaps has persisted. While some choices for s...
John D. Kececioglu, Eagu Kim
SEMWEB
2005
Springer
14 years 4 months ago
Bootstrapping Ontology Alignment Methods with APFEL
Abstract. Ontology alignment is a prerequisite in order to allow for interoperation between different ontologies and many alignment strategies have been proposed to facilitate the ...
Marc Ehrig, Steffen Staab, York Sure
ECCV
2010
Springer
13 years 9 months ago
Aligning Spatio-Temporal Signals on a Special Manifold
We investigate the spatio-temporal alignment of videos or features/signals extracted from them. Specifically, we formally define an alignment manifold and formulate the alignment p...
Ruonan Li, Rama Chellappa