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HPDC
2010
IEEE
13 years 8 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
BIOCOMP
2008
13 years 9 months ago
Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
KDD
2007
ACM
209views Data Mining» more  KDD 2007»
14 years 7 months ago
Temporal causal modeling with graphical granger methods
The need for mining causality, beyond mere statistical correlations, for real world problems has been recognized widely. Many of these applications naturally involve temporal data...
Andrew Arnold, Yan Liu, Naoki Abe
DPD
1998
117views more  DPD 1998»
13 years 7 months ago
Solving Local Cost Estimation Problem for Global Query Optimization in Multidatabase Systems
To meet users’ growing needs for accessing pre-existing heterogeneous databases, a multidatabase system (MDBS) integrating multiple databases has attracted many researchers recen...
Qiang Zhu, Per-Åke Larson
KDD
2006
ACM
115views Data Mining» more  KDD 2006»
14 years 7 months ago
Supervised probabilistic principal component analysis
Principal component analysis (PCA) has been extensively applied in data mining, pattern recognition and information retrieval for unsupervised dimensionality reduction. When label...
Shipeng Yu, Kai Yu, Volker Tresp, Hans-Peter Krieg...