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» Multiple sequence alignment by quantum genetic algorithm
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BMCBI
2004
94views more  BMCBI 2004»
13 years 8 months ago
GASP: Gapped Ancestral Sequence Prediction for proteins
Background: The prediction of ancestral protein sequences from multiple sequence alignments is useful for many bioinformatics analyses. Predicting ancestral sequences is not a sim...
Richard J. Edwards, Denis C. Shields
GECCO
2006
Springer
127views Optimization» more  GECCO 2006»
14 years 11 days ago
Multiobjective genetic algorithms for multiscaling excited state direct dynamics in photochemistry
This paper studies the effectiveness of multiobjective genetic and evolutionary algorithms in multiscaling excited state direct dynamics in photochemistry via rapid reparameteriza...
Kumara Sastry, D. D. Johnson, Alexis L. Thompson, ...
EH
1999
IEEE
125views Hardware» more  EH 1999»
14 years 1 months ago
Improving Correctness of Finite-State Machine Synthesis from Multiple Partial Input/Output Sequences
Our previous work focused on the synthesis of sequential circuits based on a partial input/output sequence. As the behavioural description of the target circuit is not known the c...
Prabhas Chongstitvatana, Chatchawit Aporntewan
EUROGP
2009
Springer
105views Optimization» more  EUROGP 2009»
14 years 1 months ago
Quantum Circuit Synthesis with Adaptive Parameters Control
The contribution presented herein proposes an adaptive genetic algorithm applied to quantum logic circuit synthesis that, dynamically adjusts its control parameters. The adaptation...
Cristian Ruican, Mihai Udrescu, Lucian Prodan, Mir...
BMCBI
2010
121views more  BMCBI 2010»
13 years 8 months ago
MS4 - Multi-Scale Selector of Sequence Signatures: An alignment-free method for classification of biological sequences
Background: While multiple alignment is the first step of usual classification schemes for biological sequences, alignment-free methods are being increasingly used as alternatives...
Eduardo Corel, Florian Pitschi, Ivan Laprevotte, G...