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» Multipolar representation of protein structure
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BMCBI
2007
128views more  BMCBI 2007»
13 years 7 months ago
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand bindin
Background: An accurate description of protein shape derived from protein structure is necessary to establish an understanding of protein-ligand interactions, which in turn will l...
Lei Xie, Philip E. Bourne
RECOMB
2003
Springer
14 years 7 months ago
Approximation of protein structure for fast similarity measures
It is shown that structural similarity between proteins can be decided well with much less information than what is used in common similarity measures. The full C representation c...
Fabian Schwarzer, Itay Lotan
RECOMB
2002
Springer
14 years 7 months ago
A dimensionality reduction approach to modeling protein flexibility
Proteins are involved either directly or indirectly in all biological processes in living organisms. It is now widely accepted that conformational changes of proteins can critical...
Miguel L. Teodoro, George N. Phillips, Lydia E. Ka...
MAGS
2007
168views more  MAGS 2007»
13 years 6 months ago
Agent-based protein structure prediction
A protein is identified by a finite sequence of amino acids, each of them chosen from a set of 20 elements. The Protein Structure Prediction Problem is the problem of predicting...
Luca Bortolussi, Agostino Dovier, Federico Fogolar...
CIKM
2009
Springer
14 years 1 months ago
Linear predictive coding representation of correlated mutation for protein sequence alignment
Background: Although both conservation and correlated mutation (CM) are important information reflecting the different sorts of context in multiple sequence alignment, most of ali...
Chan-seok Jeong, Dongsup Kim