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RECOMB
2006
Springer
14 years 10 months ago
Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting
Abstract. Peptide mass fingerprinting is a technique to identify a protein from its fragment masses obtained by mass spectrometry after enzymatic digestion. Recently, much attentio...
Hans-Michael Kaltenbach, Sebastian Böcker, Sv...
BMCBI
2010
166views more  BMCBI 2010»
13 years 10 months ago
Accurate peak list extraction from proteomic mass spectra for identification and profiling studies
Background: Mass spectrometry is an essential technique in proteomics both to identify the proteins of a biological sample and to compare proteomic profiles of different samples. ...
Nicola Barbarini, Paolo Magni
BMCBI
2010
122views more  BMCBI 2010»
13 years 10 months ago
Ovarian cancer classification based on dimensionality reduction for SELDI-TOF data
Background: Recent advances in proteomics technologies such as SELDI-TOF mass spectrometry has shown promise in the detection of early stage cancers. However, dimensionality reduc...
Kai-Lin Tang, Tong-Hua Li, Wen-Wei Xiong, Kai Chen
NAR
2006
64views more  NAR 2006»
13 years 9 months ago
The PeptideAtlas project
The completion of the sequencing of the human genome and the concurrent, rapid development of high-throughput proteomic methods have resulted in an increasing need for automated a...
Frank Desiere, Eric W. Deutsch, Nichole L. King, A...
BMCBI
2004
174views more  BMCBI 2004»
13 years 9 months ago
Implications for domain fusion protein-protein interactions based on structural information
Background: Several in silico methods exist that were developed to predict protein interactions from the copious amount of genomic and proteomic data. One of these methods is Doma...
Jer-Ming Chia, Prasanna R. Kolatkar