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13 years 8 months ago
Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data
We have developed a set of methods and tools for automatic discovery of putative regulatory signals in genome sequences. The analysis pipeline consists of gene expression data clu...
Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Ro...
AI
2008
Springer
13 years 7 months ago
Alternating-offers bargaining with one-sided uncertain deadlines: an efficient algorithm
In the arena of automated negotiations we focus on the principal negotiation protocol in bilateral settings, i.e. the alternatingoffers protocol. In the scientific community it is...
Nicola Gatti, Francesco Di Giunta, Stefano Marino
BMCBI
2010
171views more  BMCBI 2010»
13 years 7 months ago
PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
Background: Cluster analysis is an important technique for the exploratory analysis of biological data. Such data is often high-dimensional, inherently noisy and contains outliers...
Benjamin Georgi, Ivan Gesteira Costa, Alexander Sc...
BMCBI
2008
149views more  BMCBI 2008»
13 years 7 months ago
Evolution of biological sequences implies an extreme value distribution of type I for both global and local pairwise alignment s
Background: Confidence in pairwise alignments of biological sequences, obtained by various methods such as Blast or Smith-Waterman, is critical for automatic analyses of genomic d...
Olivier Bastien, Eric Maréchal
CORR
2007
Springer
189views Education» more  CORR 2007»
13 years 7 months ago
Diversity-Multiplexing Tradeoff of Asynchronous Cooperative Diversity in Wireless Networks
Synchronization of relay nodes is an important and critical issue in exploiting cooperative diversity in wireless networks. In this paper, two asynchronous cooperative diversity s...
Shuangqing Wei