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WABI
2007
Springer
14 years 1 months ago
Topology Independent Protein Structural Alignment
Abstract. Protein structural alignment is an indispensable tool used for many different studies in bioinformatics. Most structural alignment algorithms assume that the structural ...
Joe Dundas, T. Andrew Binkowski, Bhaskar DasGupta,...
CODES
2006
IEEE
14 years 1 months ago
Streamroller: : automatic synthesis of prescribed throughput accelerator pipelines
In this paper, we present a methodology for designing a pipeline of accelerators for an application. The application is modeled using sequential C language with simple stylization...
Manjunath Kudlur, Kevin Fan, Scott A. Mahlke
HPDC
2006
IEEE
14 years 1 months ago
Task Scheduling and File Replication for Data-Intensive Jobs with Batch-shared I/O
This paper addresses the problem of efficient execution of a batch of data-intensive tasks with batch-shared I/O behavior, on coupled storage and compute clusters. Two scheduling...
Gaurav Khanna 0002, Nagavijayalakshmi Vydyanathan,...
IAT
2006
IEEE
14 years 1 months ago
An Approximate Algorithm for Resource Allocation Using Combinatorial Auctions
Combinatorial Auctions (CAs), where users bid on combination of items, have emerged as a useful tool for resource allocation in distributed systems. However, two main difficulties...
Viswanath Avasarala, Himanshu Polavarapu, Tracy Mu...
IEEEARES
2006
IEEE
14 years 1 months ago
Evaluation of Network Robustness for Given Defense Resource Allocation Strategies
Since the 9/11 terrorist attacks, the effective and efficient protection of critical information infrastructures has become an even more important issue. To enhance network surviv...
Y.-S. Lin, P.-H. Tsang, C.-H. Chen, C.-L. Tseng, Y...