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BMCBI
2011
13 years 4 months ago
Screening synteny blocks in pairwise genome comparisons through integer programming
Background: It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor...
Haibao Tang, Eric Lyons, Brent S. Pedersen, James ...
ICDE
2010
IEEE
201views Database» more  ICDE 2010»
13 years 10 months ago
Vertical partitioning of relational OLTP databases using integer programming
A way to optimize performance of relational row store databases is to reduce the row widths by vertically partitioning tables into table fractions in order to minimize the number ...
Rasmus Resen Amossen
CORR
2011
Springer
215views Education» more  CORR 2011»
13 years 1 months ago
Lasserre Hierarchy, Higher Eigenvalues, and Approximation Schemes for Quadratic Integer Programming with PSD Objectives
We present an approximation scheme for optimizing certain Quadratic Integer Programming problems with positive semidefinite objective functions and global linear constraints. Thi...
Venkatesan Guruswami, Ali Kemal Sinop
AAIM
2009
Springer
101views Algorithms» more  AAIM 2009»
14 years 4 months ago
Integer Polyhedra for Program Analysis
Polyhedra are widely used in model checking and abstract interpretation. Polyhedral analysis is effective when the relationships between variables are linear, but suffers from im...
Philip J. Charles, Jacob M. Howe, Andy King
IPCO
2010
153views Optimization» more  IPCO 2010»
13 years 7 months ago
An Effective Branch-and-Bound Algorithm for Convex Quadratic Integer Programming
We present a branch-and-bound algorithm for minimizing a convex quadratic objective function over integer variables subject to convex constraints. In a given node of the enumerati...
Christoph Buchheim, Alberto Caprara, Andrea Lodi