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NIPS
2008
13 years 10 months ago
Automatic online tuning for fast Gaussian summation
Many machine learning algorithms require the summation of Gaussian kernel functions, an expensive operation if implemented straightforwardly. Several methods have been proposed to...
Vlad I. Morariu, Balaji Vasan Srinivasan, Vikas C....
IJIT
2004
13 years 9 months ago
Computing Entropy for Ortholog Detection
Abstract-- Biological sequences from different species are called orthologs if they evolved from a sequence of a common ancestor species and they have the same biological function....
Hsing-Kuo Pao, John Case
RECOMB
2001
Springer
14 years 8 months ago
Towards predicting coiled-coil protein interactions
Protein-protein interactions play a central role in many cellular functions, and as whole-genome data accumulates, computational methods for predicting these interactions become i...
Mona Singh, Peter S. Kim
RECOMB
2004
Springer
14 years 8 months ago
Maximum likelihood resolution of multi-block genotypes
We present a new algorithm for the problems of genotype phasing and block partitioning. Our algorithm is based on a new stochastic model, and on the novel concept of probabilistic...
Gad Kimmel, Ron Shamir
RECOMB
2004
Springer
14 years 8 months ago
Computational identification of evolutionarily conserved exons
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Adam C. Siepel, David Haussler