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» Network constrained clustering for gene microarray data
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BIOINFORMATICS
2005
57views more  BIOINFORMATICS 2005»
13 years 10 months ago
Network constrained clustering for gene microarray data
Dongxiao Zhu, Alfred O. Hero, Hong Cheng, Ritu Kha...
BMCBI
2007
133views more  BMCBI 2007»
13 years 11 months ago
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
Background: Gene expression measurements during the development of the fly Drosophila melanogaster are routinely used to find functional modules of temporally co-expressed genes. ...
Ivan G. Costa, Roland Krause, Lennart Opitz, Alexa...
BMCBI
2010
214views more  BMCBI 2010»
13 years 11 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper
BMCBI
2010
129views more  BMCBI 2010»
13 years 11 months ago
A temporal precedence based clustering method for gene expression microarray data
Background: Time-course microarray experiments can produce useful data which can help in understanding the underlying dynamics of the system. Clustering is an important stage in m...
Ritesh Krishna, Chang-Tsun Li, Vicky Buchanan-Woll...
BMCBI
2008
102views more  BMCBI 2008»
13 years 11 months ago
Response projected clustering for direct association with physiological and clinical response data
Background: Microarray gene expression data are often analyzed together with corresponding physiological response and clinical metadata of biological subjects, e.g. patients'...
Sung-Gon Yi, Taesung Park, Jae K. Lee