429 search results - page 16 / 86 » New Algorithms for SIMD Alignment |
BMCBI
2007
13 years 7 months ago
2007
Background: Many algorithms exist for protein structural alignment, based on internal protein coordinates or on explicit superposition of the structures. These methods are usually...
CSB
2003
IEEE
14 years 1 months ago
2003
IEEE
The problem addressed by this paper is accurate and automatic gene annotation following precise identification/annotation of exon and intron boundaries of biologically verified ...
CANDC
2005
ACM
13 years 7 months ago
2005
ACM
We propose an algorithm of global multiple sequence alignment that is based on a measure of what we call information discrepancy. The algorithm follows a progressive alignment ite...
CP
2003
Springer
14 years 29 days ago
2003
Springer
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
ICNSC
2008
IEEE
14 years 2 months ago
2008
IEEE
— This paper presents an approach to the multiple sequence alignment (MSA) problem by applying genetic algorithms with a reserve selection mechanism. MSA is one of the most funda...