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POPL
2008
ACM
14 years 8 months ago
Automatic inference of stationary fields: a generalization of java's final fields
Java programmers can document that the relationship between two objects is unchanging by declaring the field that encodes that relationship to be final. This information can be us...
Christopher Unkel, Monica S. Lam
RECOMB
2006
Springer
14 years 8 months ago
A Parsimony Approach to Genome-Wide Ortholog Assignment
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
RECOMB
2005
Springer
14 years 8 months ago
Constructing a Smallest Refining Galled Phylogenetic Network
Reticulation events occur frequently in many types of species. Therefore, to develop accurate methods for reconstructing phylogenetic networks in order to describe evolutionary his...
Trinh N. D. Huynh, Jesper Jansson, Nguyen Bao Nguy...
WEA
2010
Springer
289views Algorithms» more  WEA 2010»
14 years 3 months ago
Experiments with a Generic Dantzig-Wolfe Decomposition for Integer Programs
Abstract We report on experiments with turning the branch-price-andcut framework SCIP into a generic branch-price-and-cut solver. That is, given a mixed integer program (MIP), our ...
Gerald Gamrath, Marco E. Lübbecke
BIBM
2009
IEEE
218views Bioinformatics» more  BIBM 2009»
14 years 3 months ago
Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture
Abstract—Unacceptable execution time of Non-rigid registration (NRR) often presents a major obstacle to its routine clinical use. Parallel computing is an effective way to accele...
Yixun Liu, Andriy Fedorov, Ron Kikinis, Nikos Chri...