Background: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold ...
Abstract--With the development of high-performance computing, I/O issues have become the bottleneck for many massively parallel applications. This paper investigates scalable paral...
Jing Fu, Ning Liu, Onkar Sahni, Kenneth E. Jansen,...
We present a multiple-feature approach for determining matches between small fragments of archaeological artifacts such as Bronze-Age and Roman frescoes. In contrast with traditio...
Corey Toler-Franklin, Benedict J. Brown, Tim Weyri...
Motivation. Current approaches to RNA structure prediction range from physics-based methods, which rely on thousands of experimentally-measured thermodynamic parameters, to machin...
Shay Zakov, Yoav Goldberg, Michael Elhadad, Michal...
Data races are among the most reliable indicators of programming errors in concurrent software. For at least two decades, Lamport’s happens-before (HB) relation has served as th...
Yannis Smaragdakis, Jacob Evans, Caitlin Sadowski,...