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» Next generation sequencing in functional genomics
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BMCBI
2006
126views more  BMCBI 2006»
13 years 8 months ago
JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow
Background: Expressed sequence tag (EST) analyses provide a rapid and economical means to identify candidate genes that may be involved in a particular biological process. These E...
Mariano Latorre, Herman Silva, Juan Saba, Carito G...
DATE
2008
IEEE
148views Hardware» more  DATE 2008»
14 years 3 months ago
On Analysis and Synthesis of (n, k)-Non-Linear Feedback Shift Registers
— Non-Linear Feedback Shift Registers (NLFSRs) have been proposed as an alternative to Linear Feedback Shift Registers (LFSRs) for generating pseudo-random sequences for stream c...
Elena Dubrova, Maxim Teslenko, Hannu Tenhunen
BMCBI
2011
13 years 3 months ago
PheMaDB: A solution for storage, retrieval, and analysis of high throughput phenotype data
Background: OmniLog™ phenotype microarrays (PMs) have the capability to measure and compare the growth responses of biological samples upon exposure to hundreds of growth condit...
Wenling E. Chang, Keri Sarver, Brandon W. Higgs, T...
NAR
2007
121views more  NAR 2007»
13 years 8 months ago
WormBase: new content and better access
WormBase (http://wormbase.org), a model organism database for Caenorhabditis elegans and other related nematodes, continues to evolve and expand. Over the past year WormBase has a...
Tamberlyn Bieri, Darin Blasiar, Philip Ozersky, Ig...
BIOINFORMATICS
2010
127views more  BIOINFORMATICS 2010»
13 years 8 months ago
Analyzing taxonomic classification using extensible Markov models
Motivation: As next generation sequencing is rapidly adding new genomes, their correct placement in the taxonomy needs verification. However, the current methods for confirming cl...
Rao M. Kotamarti, Michael Hahsler, Douglas Raiford...